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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903074.1_cds_XP_016453053.1_47216
CDS Infomation

[gene=LOC107777521] [db_xref=GeneID:107777521] [protein=probable endo-1,3(4)-beta-glucanase ARB_01444 isoform X3] [protein_id=XP_016453053.1] [location=complement(join(29049..30309,30968..31878))] [gbkey=CDS]
Sequence

ATGTTGTTGAAGATAATCAAAAGACAAGTCAAAGCCATCATCACAAAACCCTTCAAAAAT
CCATATAAAACCCCTCCACAGCCTGAACCACCACAACCTTCATCTTCCTCACAATCTCTT
GCCATGTCATCATCACAGCCTTTCCTCTTCCCAAGTACTCAATCCACTGTTCTCCCTGAT
CCTTCTTCCTTTTTTGCCCCTCATCTCCTCTCAAATCCATTACCCACAAATTCTTTTTTC
CAAAATTTTGTCCTCAAGAATGGTGATCAGCCTGAATTCATACACCCTTATCTTGTAAAA
TCCTCACTTTCGTCCCTCACTCTTTGTTACCCATCTCAGTTCCACAATCCTGCTTTTATT
TACCAAAATTTCATTGCTGATTTGACTATCACTGGTTTGAATAATTCCAATCCAAATACA
CCCCATGTAATTTCATCCTTTGATGATCTTAGTGTCACATTAGACCTTCCTTCTAGTAAT
CTCAGGTTCTTTCTTGTTAAAGGTTCCCCCTTTATTACATGTAACGTTCTTGGAAATGTA
GCGCTTTCGATTTCAACAATTCATGCCATTCTTGAATGTAATTCGAATAGTAATCGTACC
AAATATACTATTAAGCTCAACAATGGGCAAACTTGGGTTTTGTATGCTTCTTCTCCCATT
GATTTGAGTCATGATTTGTCCACTATCAAGTCTGGTGTGTTTTCGGGTGTTATTCGGATT
GCTTGTTTGCCAAATTCTGACCCAACGTGTGAAGCAGTACTTGATCGTTTTAGTTCTTGT
TATCCTACAAGTGGTAATGCGGTTTTTAGTCAGCCATTTTGCTTGGAGTACAAGTGGGAA
AAGAATGGATGGGGTGACTTGCTTATGTTGGCTCACCCTCTCCATCTCCAGCTGCTTTCT
GCTGCCGATTGTTANGCGGTAACTGTTTTAGATGGATTTAAGTACAATAGTATTGATGGT
GAGCTTATTGGTGTTGTTGGAGACTCATGGATATTGAAGAGCGATCCAGTTTCTGTAACA
TGGCATTCCATTAAAGGTGTTAAGGAAGAGGCTTGTTTAGAAATAATTGATGCTTTGAAT
AAGGATGTTGCTTCGTTGGATTCGAAGGGAATATCAACAACATCGTCTTACTTTTATGGT
AAATTGATTGCGAGAGCAGCAAGGCTGGCATTGATAGCTGAAGAGGTTTGTTACCTTGAT
GTTATCCCGGTTATCCGCAAATTCTTGAAGGATACAGTTGAACCATGGTTGGAGGGGACT
TTTGAAGCAAATGGTTTCTTTTATGAATCGAAATGGGGTGGAATTGTGACTAAACAAGGG
GCGCTGGATTCGGGAGCTGACTTTGGATTTGGGGTATATAATGATCACCATTTTCATATT
GGCCATTTCCTTTATGCTATTGCAGTGCTAGCCAAGATAGACCCAATCTGGGGGAGAAAG
TATAGGCCACAAGCTTATGCACTTATGGCAGATTTTATGAATTTAAGCAGGCGAACAAAT
TCGAAGTATGCCCGCTTGAGGTGTTTTGACTTGTGGAAGCTGCATTCTTGGGCTGGGGGA
TTAACAGAATTTGCAGATGGACGGAACCAGGAGAGCACAAGTGAAGCAGTAAATGCATAC
TATTCAGCAGCTTTAATGGGTTTGGCCTATGGGGATACCAATCTTGTTGCCATTGGATCC
ACCCTTTCGGCTTTTGAGATTCATTCTGCACAGACTTGGTGGCATGTGAAAGAGGGAAGC
ACTTTGTATGGGGAAGAATTTACAAAGGATAACAGGGTGGTGGGTGTTTTATGGTCTAAC
AAAAGGGACAGCAGCCTTTGGTTTGCTCCAGCTGAATGGAGAGAGTGTAGACTTGGAATT
CAGGTCTTACCAATATTGCCCATTACTGAAGTTCTGTTTTCAGACGTTCAGTTTGTGAAG
CAGTTGGTCGAATGGACGCAGCCAGCTCTGGCAAGGGAAGGTGGGGTTGGAGAAGGGTGG
AAAGGGTTTGTGTATACATTGGAAGCAATATATGATAAAGTGGGTGCTTTGGACAAAACT
AGGAGCTTAACTGGCTTTGATGATGGAAACTCCCTTTCAAATCTACTGTGGTGGATTCAT
ACTAGGGATGATAAAGTGGAGGAAAGTGATAATGGAAGCAAGTTCTGCTGGTTCCGACAC
TACTCTCATTAA

Peptide Sequence

PEP ID

XP_016453053.1
PEP Infomation

PREDICTED: probable endo-1,3(4)-beta-glucanase ARB_01444 isoform X3 [Nicotiana tabacum]
Sequence

MLLKIIKRQVKAIITKPFKNPYKTPPQPEPPQPSSSSQSLAMSSSQPFLFPSTQSTVLPD
PSSFFAPHLLSNPLPTNSFFQNFVLKNGDQPEFIHPYLVKSSLSSLTLCYPSQFHNPAFI
YQNFIADLTITGLNNSNPNTPHVISSFDDLSVTLDLPSSNLRFFLVKGSPFITCNVLGNV
ALSISTIHAILECNSNSNRTKYTIKLNNGQTWVLYASSPIDLSHDLSTIKSGVFSGVIRI
ACLPNSDPTCEAVLDRFSSCYPTSGNAVFSQPFCLEYKWEKNGWGDLLMLAHPLHLQLLS
AADCXAVTVLDGFKYNSIDGELIGVVGDSWILKSDPVSVTWHSIKGVKEEACLEIIDALN
KDVASLDSKGISTTSSYFYGKLIARAARLALIAEEVCYLDVIPVIRKFLKDTVEPWLEGT
FEANGFFYESKWGGIVTKQGALDSGADFGFGVYNDHHFHIGHFLYAIAVLAKIDPIWGRK
YRPQAYALMADFMNLSRRTNSKYARLRCFDLWKLHSWAGGLTEFADGRNQESTSEAVNAY
YSAALMGLAYGDTNLVAIGSTLSAFEIHSAQTWWHVKEGSTLYGEEFTKDNRVVGVLWSN
KRDSSLWFAPAEWRECRLGIQVLPILPITEVLFSDVQFVKQLVEWTQPALAREGGVGEGW
KGFVYTLEAIYDKVGALDKTRSLTGFDDGNSLSNLLWWIHTRDDKVEESDNGSKFCWFRH
YSH

Transcript Sequence

Gene sequence data has not been registered.